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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921079.1_cds_XP_016470099.1_62582
CDS Infomation

[gene=LOC107792403] [db_xref=GeneID:107792403] [protein=probable prolyl 4-hydroxylase 12 isoform X2] [protein_id=XP_016470099.1] [location=complement(join(22535..22885,22976..23148,23859..23916,24331..24420,24513..24570,24804..24911,25543..25613))] [gbkey=CDS]
Sequence

ATGGCGAGCTTTTTTTGGTTTTTTATCTTCTTGGCTTTGGGGATCAGTTCTCAGGCTCTC
TTCGCCCAAAACCGAAAAGAATTGAGGGGCAAGGAGGTGAATGGGGATGACACTGTAAAG
TTGGGCCATTCTAATAGATTTGATCCCTCACAAGTCGTTCAACTCTCGTGGCGACCAAGG
GTCTTCTTGTATAGAGACTTTCTCTCAGCAGAAGAGACTGATCACTTAATCTCCTTGGTG
CATGGCAAGAGAAATAGCTCCACAAGTGATAATGCTTCATTGGGTGGGGAGAAGTTTCCA
ACCATGGGTATTCCTTTAGATGCGGAGGATCCTACTTCCTCAAGGATTGAAGAAAGGATC
TCGGCTTGGACCTTTCTGCCTAAAGGAAATAGCAGGCCATTGCATGTTCTGCGTACTGGG
CGTGAGAATTTAAAGGGGAATTATGGTTATTTTGACGGGGACTCCGCACTTAAATCCAAA
GAACCATTAATGGCAACCATCATTTTGTACCTATCAAATGTGACGCATGGTGGTCAGATC
CTCTTCCCTGGTTCGGAGAACAAGATCTTGTCCGACTGTATCAAGAGTAGTGACACCTTG
AAACCAACGAAAGGAAATGCAATCCTGTTCTTCAATGCTCACCTTGATGCATCTCCTGAC
AGGAGTAGCTCCCATGCGAGATGCCCTGTTATTGAGGGTGAAATGTGGTATGCAATCAAA
TTCTTTTATCTCAGAAGTATTACTGTACAAAAGGATCCACTACAATCGGGTGATGACACC
AATTGTACAGATGAGGATGATAACTGTGCTCAATGGGCTGCTACTGGAGAGTGTGAAAGA
AATGCTGTTTTTATGGTTGGTTCTCCTGATTATTATGGTACATGTAGGAAAAGTTGTAAT
GCATGCTAA

Peptide Sequence

PEP ID

XP_016470099.1
PEP Infomation

PREDICTED: probable prolyl 4-hydroxylase 12 isoform X2 [Nicotiana tabacum]
Sequence

MASFFWFFIFLALGISSQALFAQNRKELRGKEVNGDDTVKLGHSNRFDPSQVVQLSWRPR
VFLYRDFLSAEETDHLISLVHGKRNSSTSDNASLGGEKFPTMGIPLDAEDPTSSRIEERI
SAWTFLPKGNSRPLHVLRTGRENLKGNYGYFDGDSALKSKEPLMATIILYLSNVTHGGQI
LFPGSENKILSDCIKSSDTLKPTKGNAILFFNAHLDASPDRSSSHARCPVIEGEMWYAIK
FFYLRSITVQKDPLQSGDDTNCTDEDDNCAQWAATGECERNAVFMVGSPDYYGTCRKSCN
AC

Transcript Sequence

Gene sequence data has not been registered.